Subject: PLOS Computational Biology Volume 14(7) July 2018 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: 8bit

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New Articles in PLOS Computational Biology

PUBLISHED: July 01, 2018 to July 31, 2018

Research Articles

A dual regulation mechanism of histidine kinase CheA identified by combining network-dynamics modeling and system-level input-output data

Post-Turing tissue pattern formation: Advent of mechanochemistry

COBRAme: A computational framework for genome-scale models of metabolism and gene expression

Paxillin phosphorylation at serine 273 and its effects on Rac, Rho and adhesion dynamics

A local uPAR-plasmin-TGFbeta 1 positive feedback loop in a qualitative computational model of angiogenic sprouting explains the in vitro effect of fibrinogen variants

Age-dependent Pavlovian biases influence motor decision-making

Unsupervised clustering of temporal patterns in high-dimensional neuronal ensembles using a novel dissimilarity measure

Excitable neuronal assemblies with adaptation as a building block of brain circuits for velocity-controlled signal propagation

Subgraphs of functional brain networks identify dynamical constraints of cognitive control

Differential roles of sleep spindles and sleep slow oscillations in memory consolidation

The importance of mechanical constraints for proper polarization and psuedo-cleavage furrow generation in the early Caenorhabditis elegans embryo

Gain control with A-type potassium current: IA as a switch between divisive and subtractive inhibition

Information-theoretic analysis of realistic odor plumes: What cues are useful for determining location?

Phase-lags in large scale brain synchronization: Methodological considerations and in-silico analysis

Modelling how responsiveness to interferon improves interferon-free treatment of hepatitis C virus infection

miRAW: A deep learning-based approach to predict microRNA targets by analyzing whole microRNA transcripts

Interaction of the human erythrocyte Band 3 anion exchanger 1 (AE1, SLC4A1) with lipids and glycophorin A: Molecular organization of the Wright (Wr) blood group antigen

Cancerin: A computational pipeline to infer cancer-associated ceRNA interaction networks

Microheterogeneity-induced conduction slowing and wavefront collisions govern macroscopic conduction behavior: A computational and experimental study

A quantitative physical model of the TMS-induced discharge artifacts in EEG

A biophysically detailed computational model of urinary bladder small DRG neuron soma

Stochastic resonance enhances the rate of evidence accumulation during combined brain stimulation and perceptual decision-making

Correction of copy number induced false positives in CRISPR screens

A minimally invasive neurostimulation method for controlling abnormal synchronisation in the neuronal activity

The evolutionary dynamics of metabolic protocells

Exploration and stabilization of Ras1 mating zone: a mechanism with positive and negative feedbacks

Punishment and inspection for governing the commons in a feedback-evolving game

A marginalized two-part Beta regression model for microbiome compositional data

An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment

Real-time decision-making during emergency disease outbreaks

FusionPathway: Prediction of pathways and therapeutic targets associated with gene fusions in cancer

Shared spatiotemporal category representations in biological and artificial deep neural networks

PyPhi: A toolbox for integrated information theory

OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movement

A model for hydrophobic protrusions on peripheral membrane proteins

Bayesian comparison of explicit and implicit causal inference strategies in multisensory heading perception

Activation of the DNA-repair mechanism through NBS1 and MRE11 diffusion

Inter-trial effects in visual pop-out search: Factorial comparison of Bayesian updating models

Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning

The role of the encapsulated cargo in microcompartment assembly

Correction

Correction: A mechanistic pan-cancer pathway model informed by multi-omics data interprets stochastic cell fate responses to drugs and mitogens

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